IDENTIFICATION OF THE BACTERIA CAUSING HUANGLONGBING

Keywords: DNA, Candidatus Liberibacter asiaticus, Citrus spp., PCR.

Abstract

The objective of this study was to identify the bacterial agent responsible for huanglongbing (HLB) in citrus production areas of Panama. Leaf samples were collected from commercial citrus plantations and home orchards in the provinces of Bocas del Toro, Chiriquí, Coclé, Herrera, Panamá Oeste, and Veraguas. Samples from the IDIAP Citrus Germplasm Bank were also included. Genomic DNA was extracted using the 2× CTAB method. Polymerase chain reaction (PCR) assays were performed using specific primer sets for HLB detection, including OI1/OI2c, OI2/23S1, HLB65/HLB66, GB1/GB3, and a 226-bp primer pair. PCR products were visualized by agarose gel electrophoresis. DNA sequencing was conducted on ten citrus samples, including Creole orange, Creole lemon, Rangpur lime, and sour orange, obtained from commercial and backyard plantations. HLB was not detected in myrtle samples or in samples from the IDIAP Citrus Germplasm Bank. Sequence analysis of amplicons generated with primers HLB65/HLB66 and OI1/OI2c confirmed that the causal agent of HLB in Panama is Candidatus Liberibacter asiaticus. These results provide molecular confirmation of the presence of the HLB pathogen in affected citrus production areas and contribute to disease surveillance and management efforts in the country.

Downloads

Download data is not yet available.

References

Arcia Tejedor, A. A. (2016). Caracterización molecular del agente causal de la enfermedad Huanglongbing (HLB) en Panamá. S-05-D. XVI Congreso Nacional de Ciencia y Tecnología. Ciencia para la Equidad u el desarrollo sostenible. Asociación Panameña para el Avance de la Ciencia (APANAC) y Secretaría Nacional de Ciencia, Tecnología e Innovación (SENACYT) 19 al 22 de octubre, Hotel Wyndham Panamá, Albrook Mal. p.116. https://apanac.org.pa/wp-content/uploads/2024/07/6-libro_xvi_congreso_nacional_de_ciencia_y_tecnologia.pdf

Convención Internacional de Protección Fitosanitaria (2018). Presencia de HLB de los cítricos / Presence of Citrus HLB. https://www.ippc.int/es/countries/panama/pestreports/2018/11/presencia-de-hlb-de-los-citricos-presence-of-citrus-hlb-19/

Ferdous, R. (2024). Natural field diagnosis and molecular confirmation of fungal and bacterial watermelon pathogens in Bangladesh: A case study from the Natore and Sylhet districts. PLOS ONE, 19(11), e0307245. https://doi.org/10.1371/journal.pone.0307245

Gaceta Oficial Digital No. 27991 del jueves 17 de marzo de 2016. Ministerio de Desarrollo Agropecuario. Resolución No. OAL-039-ADM-2016 del 3 de febrero de 2016. https://faolex.fao.org/docs/pdf/pan163996.pdf

Gaceta Oficial Digital No. 29251-A del lunes 29 de marzo de 2021. Ministerio de Desarrollo Agropecuario. Resolución No. OAL-051-ADM-2021 del 19 de marzo de 2021. https://www.gacetaoficial.gob.pa/pdfTemp/29251_A/GacetaNo_29251a_20210329.pdf

Hong, Y., Luo, Y., Yi, J., He, L., Dai, L., & Yi, T. (2019). Screening nested-PCR primer for ‘Candidatus Liberibacter asiaticus’ associated with citrus Huanglongbing and application in Hunan, China. PLOS ONE, 14(2), e0212020. https://doi.org/10.1371/journal.pone.0212020

Hung, T. H., Wu, M. L., & Su, H. J. (1999). Development of a rapid method for the diagnosis of Citrus greening disease using polymerase chain reaction. Journal of Phytophatology, 147(10), 599-604. https://doi.org/10.1046/j.1439-0434.1999.00435.x

International Plant Protection Convention. (2022). International Standard for Phytosanitary Measures 27. DP 31. ‘Candidatus Liberibacter’ spp. on Citrus spp. Rome, IPPC Secretariat, FAO. https://assets.ippc.int/static/media/files/publication/en/2022/03/DP_31_2022_CaLiberibacterCitrus_2022-03-15.pdf

Jagoueix, S., Bové, J. M., & Garnier, M. (1996). PCR detection of the two ‘Candidatus’ Liberibacter species associated with greening disease of citrus. Molecular and Cellular Probes, 10, 43-50. https://doi.org/10.1006/mcpr.1996.0006

Kokane, S. B., Bhose, S., Kokane, A., Gubyad, M., & Ghosh, D. K. (2020). Molecular detection, identification, and sequence analysis of 'Candidatus Liberibacter asiaticus' associated with Huanglongbing disease of citrus in North India. 3 Biotech, 10, 341. https://doi.org/10.1007/s13205-020-02334-x

Lu, C., Zhang, X., Cai, J., Ou, C., Ding, X., & Fu, Z. (2025). First report of Soft Rot of Ranunculus ternatus Thunb. caused by Pseudomonas fluorescens in China. The American Phytopathological Society (APS). Online APS Publications. Plant Disease. https://doi.org/10.1094/PDIS-07-25-1555-PDN

Mirsam, H., Suriani, Aqil, M., Azrai, M., Efendi, R., Muliadi, A., Sembiring, H., & Azis, A. I. (2022). Molecular characterization of indigenous microbes and its potential as a biological control agent of Fusarium stem rot disease (Fusarium verticillioides) on maize. Heliyon, 8(12), e11960. https://doi.org/10.1016/j.heliyon.2022.e11960

Nugroho, K., Purwito, A., Sukma, D., Kosmiatin, M., Santoso, T. J., Akhdiya, A., Yusuf, H. M., Aditama, R., & Reflinur, R. (2025). Application of newly designed primer for Huanglongbing disease detection in Citrus plants. BIO Web of Conferences 184, 02001 (2025). ISISBMB 2025. https://doi.org/10.1051/bioconf/202518402001

Ragavi, G., Muthamilan, M., Nakkeeran, S., Kumaravadivel, N. Sivakumar, U., & Suganthi, A. (2019). Molecular Detection of the Causative Agent of Soft Rot (Pectobacterium carotovorum subsp carotovorum) in Banana (Musa sp.). International Journal of Current Microbiology and Applied Sciences, 8(11), 1854-1868. https://www.researchgate.net/publication/337791510_Molecular_Detection_of_the_Causative_Agent_of_Soft_Rot_Pectobacterium_carotovorum_subsp_carotovorum_in_Banana_Musa_sp

Santosa, A. I., Hilmany, T., Dewi, N. A., Rahmawati, N. E., Putri, E. A., Hafidsya, T., Setyaningrum, A. V., Dewi, R. E., Sari G. N. P., Manao Nubatonis, N. B. F., & Widyawan, A. (2024). Cross amplification of 16S rRNA bacterial primer 27F/1492R on horticultural crop chloroplast genome. Agricultural Science, 7(2), 172-183. https://doi.org/10.55173/agriscience.v7i2.132

Tatineni, S., Sagaram, U. S., Gowda, S., Robertson, C. J., Dawson, W. O., Iwanami, T., & Wang, N. (2008). In Planta Distribution of ‘Candidatus Liberibacter asiaticus’ as Revealed by Polymerase Chain Reaction (PCR) and Real-Time PCR. Phytopathology, 98(5), 592-599. https://doi.org/10.1094/PHYTO-98-5-0592

Teixeira, D. C., Danet, J. L., Eveillard, S., Martins, E. C., de Jesus Jr, W. C., Yamamoto, P. T., Lopes, S. A., Bassanezi, R. B., Ayres, A. J., Saillard, C., & Bove, J. M. (2005). Citrus huanglongbing in Sao Paulo State, Brazil: PCR detection of the ‘Candidatus’ Liberibacter species associated with the disease. Molecular and Cellular Probes, 19(3), 173-179. https://doi.org/10.1016/j.mcp.2004.11.002

Published
2026-01-08
How to Cite
Bieberach-Forero, C., Aguilar-Reyes, Z., & Jaén, M. (2026). IDENTIFICATION OF THE BACTERIA CAUSING HUANGLONGBING. Ciencia Agropecuaria, (42), 31-41. Retrieved from http://revistacienciaagropecuaria.ac.pa/index.php/ciencia-agropecuaria/article/view/690
Section
Artículos

Most read articles by the same author(s)